Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 AC004264.1-201ENST00000608354 794 ntBASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 LINC01568-207ENST00000641790 1380 ntBASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA4Q9Y5G9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
PCDHGA4Q9Y5G9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGA4Q9Y5G9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 AC090142.2-201ENST00000483263 416 ntBASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 AC125437.2-201ENST00000625180 2167 ntBASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA4Q9Y5G9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 AFG3L1P-217ENST00000557444 2447 ntBASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA4Q9Y5G9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 KRT18P16-201ENST00000510337 1294 ntBASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 NAPSB-206ENST00000562112 1266 ntBASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA4Q9Y5G9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms