Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 MIR4785-201ENST00000585005 73 ntBASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 AP000692.2-201ENST00000608391 879 ntBASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB13Q9Y5F0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.02■□□□□ 0.95
PCDHB13Q9Y5F0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB13Q9Y5F0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB13Q9Y5F0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 TSPY7P-201ENST00000431358 1114 ntBASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 MTND2P7-201ENST00000521337 640 ntBASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 AP003071.4-201ENST00000562276 1284 ntBASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 RN7SL275P-201ENST00000582762 335 ntBASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 REXO1L10P-201ENST00000615707 1290 ntBASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 REXO1L12P-201ENST00000622156 912 ntBASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 KRT17P2-201ENST00000300992 1314 ntBASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PCDHB13Q9Y5F0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 SNORA78-201ENST00000459373 127 ntBASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 DGCR10-201ENST00000609839 495 ntBASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 AC066615.1-201ENST00000640911 628 ntBASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 AL049812.1-201ENST00000432563 2267 ntBASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCDHB13Q9Y5F0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHB13Q9Y5F0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms