Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPS3Q9UNS2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 FEM1AP3-201ENST00000403722 1741 ntBASIC16.96■□□□□ 0.31
COPS3Q9UNS2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.96■□□□□ 0.31
COPS3Q9UNS2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 PNMA6B-201ENST00000538162 1200 ntBASIC16.96■□□□□ 0.31
COPS3Q9UNS2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPS3Q9UNS2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 AC135050.7-201ENST00000624508 2218 ntBASIC16.96■□□□□ 0.3
COPS3Q9UNS2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPS3Q9UNS2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 SLC29A4P1-201ENST00000398760 971 ntBASIC16.95■□□□□ 0.3
COPS3Q9UNS2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 TUBB8P6-201ENST00000436895 1288 ntBASIC16.95■□□□□ 0.3
COPS3Q9UNS2 TSPY6P-201ENST00000448518 926 ntBASIC16.95■□□□□ 0.3
COPS3Q9UNS2 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.95■□□□□ 0.3
COPS3Q9UNS2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.95■□□□□ 0.3
COPS3Q9UNS2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 AC120498.8-201ENST00000614275 531 ntBASIC16.95■□□□□ 0.3
COPS3Q9UNS2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.95■□□□□ 0.3
COPS3Q9UNS2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 AL390961.4-201ENST00000623958 2535 ntBASIC16.94■□□□□ 0.3
COPS3Q9UNS2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 AC097658.1-201ENST00000475555 843 ntBASIC16.94■□□□□ 0.3
COPS3Q9UNS2 AC098934.4-201ENST00000564127 592 ntBASIC16.94■□□□□ 0.3
COPS3Q9UNS2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 AC060766.5-201ENST00000590539 871 ntBASIC16.94■□□□□ 0.3
COPS3Q9UNS2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms