Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 AL359075.1-203ENST00000462729 1002 ntBASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 KRT8P32-201ENST00000512863 1461 ntBASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 AC036111.1-201ENST00000533973 1582 ntBASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYNPO2Q9UMS6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 KRT18P38-201ENST00000449496 1282 ntBASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 AC034232.1-201ENST00000506026 1064 ntBASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SYNPO2Q9UMS6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 FAM86EP-206ENST00000510506 987 ntBASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 HYMAI.1-201ENST00000620949 238 ntBASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SYNPO2Q9UMS6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 AL136038.3-201ENST00000561909 1096 ntBASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 AL358472.4-201ENST00000633140 710 ntBASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 AP000550.4-202ENST00000639755 178 ntBASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYNPO2Q9UMS6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 HOXB1-202ENST00000577092 1414 ntBASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYNPO2Q9UMS6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms