Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 AL671277.2-201ENST00000458060 996 ntBASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 AC008622.2-201ENST00000617006 1229 ntBASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 AL121956.5-201ENST00000625261 221 ntBASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 SLC25A24-204ENST00000569674 2357 ntBASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 MIR4674-201ENST00000582457 87 ntBASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 AP000550.4-202ENST00000639755 178 ntBASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRIT1Q9P2V4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
LRIT1Q9P2V4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 PCED1CP-201ENST00000419887 785 ntBASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 FAM86EP-206ENST00000510506 987 ntBASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRIT1Q9P2V4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 KRT18P38-201ENST00000449496 1282 ntBASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 GCSHP2-201ENST00000560971 527 ntBASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 CR769767.2-201ENST00000622735 460 ntBASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.38■□□□□ 0.53
LRIT1Q9P2V4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms