Protein–RNA interactions for Protein: Q9P2B4

CTTNBP2NL, CTTNBP2 N-terminal-like protein, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NLQ9P2B4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 RNA5SP413-201ENST00000516373 109 ntBASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTTNBP2NLQ9P2B4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 AC004264.1-201ENST00000608354 794 ntBASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 AL031598.1-201ENST00000561511 1773 ntBASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTTNBP2NLQ9P2B4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 AP003097.1-201ENST00000530657 1135 ntBASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CTTNBP2NLQ9P2B4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 KRT17P3-201ENST00000420566 1262 ntBASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 AL160286.2-201ENST00000567150 934 ntBASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 C1QL1P1-201ENST00000568105 661 ntBASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 HLA-A-209ENST00000638375 975 ntBASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 Z98044.1-201ENST00000632503 1764 ntBASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 AC093525.10-201ENST00000625130 1569 ntBASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 AC104581.1-202ENST00000635932 2618 ntBASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTTNBP2NLQ9P2B4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CTTNBP2NLQ9P2B4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
CTTNBP2NLQ9P2B4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.2■□□□□ 0.82
CTTNBP2NLQ9P2B4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTTNBP2NLQ9P2B4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.2■□□□□ 0.82
CTTNBP2NLQ9P2B4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms