Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AF213884.3-201ENST00000563833 479 ntBASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 KRT8P17-201ENST00000453110 1448 ntBASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHCHD3Q9NX63 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 NFIC-211ENST00000641145 8399 ntBASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 AC096631.2-201ENST00000436136 790 ntBASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHCHD3Q9NX63 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 AC087633.2-202ENST00000565166 1439 ntBASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
CHCHD3Q9NX63 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHCHD3Q9NX63 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms