Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 TEX21P-204ENST00000641479 1693 ntBASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMCO4Q9NRQ5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.96□□□□□ -0.01
SMCO4Q9NRQ5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SMCO4Q9NRQ5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMCO4Q9NRQ5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SMCO4Q9NRQ5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMCO4Q9NRQ5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMCO4Q9NRQ5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMCO4Q9NRQ5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms