Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 RASA4DP-201ENST00000460726 1199 ntBASIC22.49■■□□□ 1.19
DDX4Q9NQI0 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.49■■□□□ 1.19
DDX4Q9NQI0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX4Q9NQI0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 HBZP1-201ENST00000354915 429 ntBASIC22.48■■□□□ 1.19
DDX4Q9NQI0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.48■■□□□ 1.19
DDX4Q9NQI0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 MCCD1P1-208ENST00000445732 328 ntBASIC22.47■■□□□ 1.19
DDX4Q9NQI0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
DDX4Q9NQI0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 MIR3180-5-201ENST00000583743 153 ntBASIC22.46■■□□□ 1.19
DDX4Q9NQI0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
DDX4Q9NQI0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
DDX4Q9NQI0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.45■■□□□ 1.18
DDX4Q9NQI0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms