Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 HEIH-201ENST00000623091 1652 ntBASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 NCF1B-203ENST00000435988 1254 ntBASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 MIR4758-201ENST00000577688 71 ntBASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 AC008687.6-201ENST00000596318 630 ntBASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 KRT8P41-201ENST00000533985 1514 ntBASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC52A3Q9NQ40 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 AL160286.2-201ENST00000567150 934 ntBASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 AL499627.1-201ENST00000569373 2188 ntBASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SLC52A3Q9NQ40 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 MTMR9LP-203ENST00000426597 1545 ntBASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC52A3Q9NQ40 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 AC098934.4-201ENST00000564127 592 ntBASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 SOX15-203ENST00000570788 1093 ntBASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC52A3Q9NQ40 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms