Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 AC092647.4-201ENST00000457211 535 ntBASIC20.57■□□□□ 0.88
NXF3Q9H4D5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 LINC01238-205ENST00000567549 1107 ntBASIC20.57■□□□□ 0.88
NXF3Q9H4D5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.56■□□□□ 0.88
NXF3Q9H4D5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 AC140113.3-201ENST00000605663 199 ntBASIC20.56■□□□□ 0.88
NXF3Q9H4D5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NXF3Q9H4D5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 AL359075.1-203ENST00000462729 1002 ntBASIC20.55■□□□□ 0.88
NXF3Q9H4D5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 AL031432.5-201ENST00000641059 760 ntBASIC20.55■□□□□ 0.88
NXF3Q9H4D5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NXF3Q9H4D5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 AL023284.2-201ENST00000405850 579 ntBASIC20.54■□□□□ 0.88
NXF3Q9H4D5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.54■□□□□ 0.88
NXF3Q9H4D5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms