Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC073111.5-205ENST00000641717 521 ntBASIC19.84■□□□□ 0.77
DDX47Q9H0S4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX47Q9H0S4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.83■□□□□ 0.77
DDX47Q9H0S4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX47Q9H0S4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 KRT18P16-201ENST00000510337 1294 ntBASIC19.82■□□□□ 0.76
DDX47Q9H0S4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 RAP2CP1-201ENST00000605103 478 ntBASIC19.82■□□□□ 0.76
DDX47Q9H0S4 AC080038.1-201ENST00000611274 1154 ntBASIC19.82■□□□□ 0.76
DDX47Q9H0S4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX47Q9H0S4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 LTB4R2-202ENST00000528054 3092 ntBASIC19.81■□□□□ 0.76
DDX47Q9H0S4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 MIR663A-201ENST00000385250 93 ntBASIC19.81■□□□□ 0.76
DDX47Q9H0S4 MIPEPP3-201ENST00000412105 444 ntBASIC19.81■□□□□ 0.76
DDX47Q9H0S4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX47Q9H0S4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms