Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK3BQ9BT76 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
UPK3BQ9BT76 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK3BQ9BT76 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.25□□□□□ -0.29
UPK3BQ9BT76 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UPK3BQ9BT76 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UPK3BQ9BT76 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 MIR1238-201ENST00000408483 83 ntBASIC13.24□□□□□ -0.29
UPK3BQ9BT76 AC011506.1-201ENST00000474329 610 ntBASIC13.24□□□□□ -0.29
UPK3BQ9BT76 Z85996.1-201ENST00000494644 937 ntBASIC13.24□□□□□ -0.29
UPK3BQ9BT76 NAPSB-206ENST00000562112 1266 ntBASIC13.24□□□□□ -0.29
UPK3BQ9BT76 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 AC145285.6-201ENST00000604632 637 ntBASIC13.24□□□□□ -0.29
UPK3BQ9BT76 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
UPK3BQ9BT76 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.23□□□□□ -0.29
UPK3BQ9BT76 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 AC096733.2-201ENST00000609937 1394 ntBASIC13.23□□□□□ -0.29
UPK3BQ9BT76 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 ECEL1P3-201ENST00000427961 737 ntBASIC13.23□□□□□ -0.29
UPK3BQ9BT76 FAM207BP-201ENST00000447172 505 ntBASIC13.23□□□□□ -0.29
UPK3BQ9BT76 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
UPK3BQ9BT76 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.22□□□□□ -0.29
UPK3BQ9BT76 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms