Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 NFIC-211ENST00000641145 8399 ntBASIC17.94■□□□□ 0.46
NR1H4Q96RI1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 KRT16P6-202ENST00000425692 1426 ntBASIC17.93■□□□□ 0.46
NR1H4Q96RI1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 AC096631.2-201ENST00000436136 790 ntBASIC17.93■□□□□ 0.46
NR1H4Q96RI1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 PBX2P1-201ENST00000493219 1291 ntBASIC17.93■□□□□ 0.46
NR1H4Q96RI1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.93■□□□□ 0.46
NR1H4Q96RI1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 AL356309.3-201ENST00000624132 1934 ntBASIC17.92■□□□□ 0.46
NR1H4Q96RI1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NR1H4Q96RI1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.91■□□□□ 0.46
NR1H4Q96RI1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 AC008175.2-201ENST00000612840 297 ntBASIC17.91■□□□□ 0.46
NR1H4Q96RI1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H4Q96RI1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms