Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ODF3Q96PU9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ODF3Q96PU9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ODF3Q96PU9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 Z85996.1-201ENST00000494644 937 ntBASIC14.06□□□□□ -0.16
ODF3Q96PU9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 AC124016.1-201ENST00000609552 612 ntBASIC14.06□□□□□ -0.16
ODF3Q96PU9 AL353708.3-201ENST00000610272 989 ntBASIC14.06□□□□□ -0.16
ODF3Q96PU9 AC110285.5-201ENST00000611501 352 ntBASIC14.06□□□□□ -0.16
ODF3Q96PU9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 AC131212.4-201ENST00000623606 975 ntBASIC14.06□□□□□ -0.16
ODF3Q96PU9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 AL023875.1-201ENST00000640777 796 ntBASIC14.06□□□□□ -0.16
ODF3Q96PU9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ODF3Q96PU9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF3Q96PU9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 ESRRAP1-201ENST00000400596 1257 ntBASIC14.05□□□□□ -0.16
ODF3Q96PU9 NIFKP9-201ENST00000419265 221 ntBASIC14.05□□□□□ -0.16
ODF3Q96PU9 AL353807.1-201ENST00000427475 662 ntBASIC14.05□□□□□ -0.16
ODF3Q96PU9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 AC233263.1-201ENST00000578059 224 ntBASIC14.05□□□□□ -0.16
ODF3Q96PU9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ODF3Q96PU9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF3Q96PU9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
ODF3Q96PU9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ODF3Q96PU9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ODF3Q96PU9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ODF3Q96PU9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms