Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.37□□□□□ -0.11
AP1S3Q96PC3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 LINC01465-201ENST00000408887 1940 ntBASIC14.36□□□□□ -0.11
AP1S3Q96PC3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
AP1S3Q96PC3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 KRT8P17-201ENST00000453110 1448 ntBASIC14.35□□□□□ -0.11
AP1S3Q96PC3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 AC123595.1-201ENST00000440769 1046 ntBASIC14.35□□□□□ -0.11
AP1S3Q96PC3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S3Q96PC3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms