Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 TSPY23P-201ENST00000440136 739 ntBASIC13.8□□□□□ -0.2
C9orf85Q96MD7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 AC142086.2-201ENST00000569753 217 ntBASIC13.8□□□□□ -0.2
C9orf85Q96MD7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.8□□□□□ -0.2
C9orf85Q96MD7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf85Q96MD7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 MIR935-201ENST00000401179 91 ntBASIC13.79□□□□□ -0.2
C9orf85Q96MD7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 NBPF21P-201ENST00000425093 1451 ntBASIC13.79□□□□□ -0.2
C9orf85Q96MD7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
C9orf85Q96MD7 AL390961.4-201ENST00000623958 2535 ntBASIC13.79□□□□□ -0.2
C9orf85Q96MD7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 BICD1-207ENST00000551848 1962 ntBASIC13.78□□□□□ -0.2
C9orf85Q96MD7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C9orf85Q96MD7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms