Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 AC020916.1-201ENST00000587762 1774 ntBASIC14.55□□□□□ -0.08
LINC00479Q96M42 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 AC106820.2-201ENST00000563775 3264 ntBASIC14.54□□□□□ -0.08
LINC00479Q96M42 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LINC00479Q96M42 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00479Q96M42 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 CNN2P6-201ENST00000439038 900 ntBASIC14.53□□□□□ -0.08
LINC00479Q96M42 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 AL589743.5-201ENST00000616611 1050 ntBASIC14.53□□□□□ -0.08
LINC00479Q96M42 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00479Q96M42 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.53□□□□□ -0.08
LINC00479Q96M42 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00479Q96M42 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00479Q96M42 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00479Q96M42 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.52□□□□□ -0.08
LINC00479Q96M42 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00479Q96M42 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00479Q96M42 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00479Q96M42 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00479Q96M42 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LINC00479Q96M42 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00479Q96M42 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC00479Q96M42 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00479Q96M42 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00479Q96M42 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00479Q96M42 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00479Q96M42 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms