Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.14■□□□□ 0.49
ITCHQ96J02 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.14■□□□□ 0.49
ITCHQ96J02 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ITCHQ96J02 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ITCHQ96J02 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.13■□□□□ 0.49
ITCHQ96J02 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
ITCHQ96J02 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ITCHQ96J02 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ITCHQ96J02 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
ITCHQ96J02 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 NCF1B-203ENST00000435988 1254 ntBASIC18.13■□□□□ 0.49
ITCHQ96J02 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.13■□□□□ 0.49
ITCHQ96J02 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.13■□□□□ 0.49
ITCHQ96J02 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.13■□□□□ 0.49
ITCHQ96J02 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ITCHQ96J02 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ITCHQ96J02 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ITCHQ96J02 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.12■□□□□ 0.49
ITCHQ96J02 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.12■□□□□ 0.49
ITCHQ96J02 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ITCHQ96J02 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.12■□□□□ 0.49
ITCHQ96J02 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.12■□□□□ 0.49
ITCHQ96J02 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.12■□□□□ 0.49
ITCHQ96J02 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ITCHQ96J02 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ITCHQ96J02 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ITCHQ96J02 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.12■□□□□ 0.49
ITCHQ96J02 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.12■□□□□ 0.49
ITCHQ96J02 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.11■□□□□ 0.49
ITCHQ96J02 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.11■□□□□ 0.49
ITCHQ96J02 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.11■□□□□ 0.49
ITCHQ96J02 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.11■□□□□ 0.49
ITCHQ96J02 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.11■□□□□ 0.49
ITCHQ96J02 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 SOX15-203ENST00000570788 1093 ntBASIC18.11■□□□□ 0.49
ITCHQ96J02 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ITCHQ96J02 AC083906.6-201ENST00000641366 219 ntBASIC18.11■□□□□ 0.49
ITCHQ96J02 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ITCHQ96J02 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ITCHQ96J02 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ITCHQ96J02 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ITCHQ96J02 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ITCHQ96J02 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms