Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 NOC2LP1-202ENST00000452600 2235 ntBASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 PCDHB18P-201ENST00000524813 2368 ntBASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC47A1Q96FL8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 BCL2-203ENST00000589955 5011 ntBASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC47A1Q96FL8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 GUSBP6-202ENST00000438529 1198 ntBASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC47A1Q96FL8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 AC097658.1-201ENST00000475555 843 ntBASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC47A1Q96FL8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms