Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPS1Q92902 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.34■□□□□ 0.37
HPS1Q92902 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
HPS1Q92902 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.34■□□□□ 0.37
HPS1Q92902 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HPS1Q92902 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.34■□□□□ 0.37
HPS1Q92902 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.34■□□□□ 0.37
HPS1Q92902 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.34■□□□□ 0.37
HPS1Q92902 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.34■□□□□ 0.37
HPS1Q92902 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HPS1Q92902 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HPS1Q92902 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.34■□□□□ 0.37
HPS1Q92902 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.34■□□□□ 0.37
HPS1Q92902 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.34■□□□□ 0.37
HPS1Q92902 TMEM179-206ENST00000616017 1645 ntBASIC17.34■□□□□ 0.37
HPS1Q92902 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HPS1Q92902 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPS1Q92902 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.33■□□□□ 0.37
HPS1Q92902 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.33■□□□□ 0.37
HPS1Q92902 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.33■□□□□ 0.37
HPS1Q92902 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.33■□□□□ 0.37
HPS1Q92902 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HPS1Q92902 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.33■□□□□ 0.37
HPS1Q92902 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HPS1Q92902 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS1Q92902 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS1Q92902 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HPS1Q92902 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HPS1Q92902 LSM12P1-201ENST00000411836 588 ntBASIC17.33■□□□□ 0.36
HPS1Q92902 DUSP5P2-201ENST00000426873 1033 ntBASIC17.33■□□□□ 0.36
HPS1Q92902 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.33■□□□□ 0.36
HPS1Q92902 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HPS1Q92902 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HPS1Q92902 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.33■□□□□ 0.36
HPS1Q92902 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
HPS1Q92902 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 AL354751.1-201ENST00000412768 1863 ntBASIC17.33■□□□□ 0.36
HPS1Q92902 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS1Q92902 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.32■□□□□ 0.36
HPS1Q92902 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS1Q92902 AC090164.3-201ENST00000610780 2143 ntBASIC17.32■□□□□ 0.36
HPS1Q92902 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HPS1Q92902 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS1Q92902 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPS1Q92902 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.32■□□□□ 0.36
HPS1Q92902 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HPS1Q92902 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
HPS1Q92902 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.32■□□□□ 0.36
HPS1Q92902 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS1Q92902 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 PKD1P1-201ENST00000458669 6805 ntBASIC17.32■□□□□ 0.36
HPS1Q92902 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HPS1Q92902 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS1Q92902 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS1Q92902 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms