Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 CKBP1-201ENST00000565489 1086 ntBASIC20.49■□□□□ 0.87
SEMA4DQ92854 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA4DQ92854 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
SEMA4DQ92854 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA4DQ92854 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA4DQ92854 CROCCP3-202ENST00000420820 1947 ntBASIC20.49■□□□□ 0.87
SEMA4DQ92854 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA4DQ92854 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEMA4DQ92854 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 TSPY15P-201ENST00000457163 923 ntBASIC20.48■□□□□ 0.87
SEMA4DQ92854 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SEMA4DQ92854 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEMA4DQ92854 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 AC093827.2-201ENST00000512654 315 ntBASIC20.47■□□□□ 0.87
SEMA4DQ92854 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEMA4DQ92854 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.47■□□□□ 0.87
SEMA4DQ92854 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA4DQ92854 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA4DQ92854 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA4DQ92854 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.46■□□□□ 0.87
SEMA4DQ92854 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEMA4DQ92854 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.45■□□□□ 0.87
SEMA4DQ92854 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA4DQ92854 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 AL596275.1-201ENST00000423464 877 ntBASIC20.45■□□□□ 0.86
SEMA4DQ92854 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA4DQ92854 RBM17P1-201ENST00000453646 1190 ntBASIC20.45■□□□□ 0.86
SEMA4DQ92854 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 MIR4497-201ENST00000583208 89 ntBASIC20.45■□□□□ 0.86
SEMA4DQ92854 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEMA4DQ92854 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.45■□□□□ 0.86
SEMA4DQ92854 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms