Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF138Q8WVD3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 AC073508.3-201ENST00000619697 1419 ntBASIC17.22■□□□□ 0.35
RNF138Q8WVD3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 WWOX-216ENST00000569818 525 ntBASIC17.22■□□□□ 0.35
RNF138Q8WVD3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF138Q8WVD3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF138Q8WVD3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF138Q8WVD3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
RNF138Q8WVD3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF138Q8WVD3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RNF138Q8WVD3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 HEIH-201ENST00000623091 1652 ntBASIC17.2■□□□□ 0.34
RNF138Q8WVD3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 AC113347.1-201ENST00000413321 391 ntBASIC17.2■□□□□ 0.34
RNF138Q8WVD3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 AL138966.2-201ENST00000621997 464 ntBASIC17.2■□□□□ 0.34
RNF138Q8WVD3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF138Q8WVD3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 ECEL1P3-201ENST00000427961 737 ntBASIC17.19■□□□□ 0.34
RNF138Q8WVD3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 CR769767.2-201ENST00000622735 460 ntBASIC17.19■□□□□ 0.34
RNF138Q8WVD3 RCC2P3-201ENST00000418112 1537 ntBASIC17.19■□□□□ 0.34
RNF138Q8WVD3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 AC006333.2-201ENST00000607957 2099 ntBASIC17.19■□□□□ 0.34
RNF138Q8WVD3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF138Q8WVD3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms