Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC32.61■■■□□ 2.81
TRIM41Q8WV44 TREX1-205ENST00000625293 1783 ntBASIC32.6■■■□□ 2.81
TRIM41Q8WV44 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 PMS2P2-201ENST00000425039 1128 ntBASIC32.6■■■□□ 2.81
TRIM41Q8WV44 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC32.6■■■□□ 2.81
TRIM41Q8WV44 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 TBCB-205ENST00000585746 875 ntTSL 3 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
TRIM41Q8WV44 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 ZNF815P-204ENST00000434898 1737 ntBASIC32.58■■■□□ 2.81
TRIM41Q8WV44 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 MIR564-202ENST00000385049 94 ntBASIC32.58■■■□□ 2.81
TRIM41Q8WV44 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 BX640515.1-201ENST00000617215 977 ntBASIC32.58■■■□□ 2.81
TRIM41Q8WV44 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRIM41Q8WV44 AC096733.2-201ENST00000609937 1394 ntBASIC32.58■■■□□ 2.81
TRIM41Q8WV44 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 HLA-J-203ENST00000494367 1087 ntBASIC32.57■■■□□ 2.8
TRIM41Q8WV44 AC106795.1-205ENST00000512851 1056 ntBASIC32.57■■■□□ 2.8
TRIM41Q8WV44 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 AC073130.3-201ENST00000624389 2278 ntBASIC32.57■■■□□ 2.8
TRIM41Q8WV44 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC32.57■■■□□ 2.8
TRIM41Q8WV44 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
TRIM41Q8WV44 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
TRIM41Q8WV44 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 AL590627.1-203ENST00000421194 1026 ntBASIC32.54■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms