Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 AC020763.4-201ENST00000623414 4170 ntBASIC11.98□□□□□ -0.49
SVIPQ8NHG7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SVIPQ8NHG7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 AL096817.1-201ENST00000623904 1775 ntBASIC11.97□□□□□ -0.49
SVIPQ8NHG7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 AC068587.6-202ENST00000641839 5619 ntBASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC11.97□□□□□ -0.49
SVIPQ8NHG7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 FLJ13224-201ENST00000313737 1514 ntBASIC11.96□□□□□ -0.49
SVIPQ8NHG7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SVIPQ8NHG7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
SVIPQ8NHG7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SVIPQ8NHG7 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms