Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 COPS8-203ENST00000409334 794 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 HMGA1P5-201ENST00000412453 271 ntBASIC5.87□□□□□ -1.47
SYNE1Q8NF91 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 DUSP5P1-201ENST00000441325 1139 ntBASIC5.87□□□□□ -1.47
SYNE1Q8NF91 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 TMEM179-206ENST00000616017 1645 ntBASIC5.87□□□□□ -1.47
SYNE1Q8NF91 AC007225.1-201ENST00000566331 1836 ntBASIC5.87□□□□□ -1.47
SYNE1Q8NF91 ME2-216ENST00000639850 2331 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE1Q8NF91 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TSPY5P-201ENST00000426936 936 ntBASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC096733.2-201ENST00000609937 1394 ntBASIC5.86□□□□□ -1.47
SYNE1Q8NF91 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC026396.1-201ENST00000419388 421 ntBASIC5.86□□□□□ -1.47
SYNE1Q8NF91 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AP000550.4-202ENST00000639755 178 ntBASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TFP1-202ENST00000475455 1573 ntBASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AP002414.2-201ENST00000591780 3365 ntBASIC5.86□□□□□ -1.47
SYNE1Q8NF91 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
SYNE1Q8NF91 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms