Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 MIR6786-201ENST00000616843 113 ntBASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 AC006333.2-201ENST00000607957 2099 ntBASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 AC011506.1-201ENST00000474329 610 ntBASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 AC130371.2-201ENST00000619443 611 ntBASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 FSCN1P1-201ENST00000568912 1481 ntBASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM35BQ8NCS4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 B3GAT3P1-201ENST00000471720 806 ntBASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 AL049637.2-201ENST00000641778 930 ntBASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM35BQ8NCS4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 AC008040.2-201ENST00000461049 708 ntBASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 AC113410.3-201ENST00000623366 203 ntBASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM35BQ8NCS4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TMEM35BQ8NCS4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TMEM35BQ8NCS4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
TMEM35BQ8NCS4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 FAM207BP-201ENST00000447172 505 ntBASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 Z99916.2-201ENST00000604037 246 ntBASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM35BQ8NCS4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35BQ8NCS4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM35BQ8NCS4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms