Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 FEM1AP3-201ENST00000403722 1741 ntBASIC19.76■□□□□ 0.75
CCDC89Q8N998 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 AL512353.2-201ENST00000448759 1962 ntBASIC19.75■□□□□ 0.75
CCDC89Q8N998 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC89Q8N998 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC89Q8N998 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC89Q8N998 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC89Q8N998 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC89Q8N998 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC89Q8N998 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms