Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSMEM1Q8N8F7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSMEM1Q8N8F7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSMEM1Q8N8F7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSMEM1Q8N8F7 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.44■□□□□ 0.38
LSMEM1Q8N8F7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 KRT8P41-201ENST00000533985 1514 ntBASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 CD99P1-205ENST00000527459 561 ntBASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 AL445675.2-201ENST00000620291 557 ntBASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 AC093525.10-201ENST00000625130 1569 ntBASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSMEM1Q8N8F7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 TSPY23P-201ENST00000440136 739 ntBASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSMEM1Q8N8F7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 POU5F1P3-201ENST00000428824 1078 ntBASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 AC128676.1-201ENST00000454392 318 ntBASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 Z85996.1-201ENST00000494644 937 ntBASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 AL353708.3-201ENST00000610272 989 ntBASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSMEM1Q8N8F7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 AL031598.1-201ENST00000561511 1773 ntBASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 NIFKP9-201ENST00000419265 221 ntBASIC17.4■□□□□ 0.38
LSMEM1Q8N8F7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms