Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 RN7SL121P-201ENST00000584223 273 ntBASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 AC006557.6-201ENST00000623071 864 ntBASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EFCAB3Q8N7B9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 KRT17P2-201ENST00000300992 1314 ntBASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 AC005829.2-201ENST00000571422 1056 ntBASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EFCAB3Q8N7B9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 COA4-204ENST00000541455 1038 ntTSL 5 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 AC137695.1-201ENST00000604126 489 ntBASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFCAB3Q8N7B9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFCAB3Q8N7B9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms