Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC26.48■■□□□ 1.83
XRN1Q8IZH2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC26.48■■□□□ 1.83
XRN1Q8IZH2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
XRN1Q8IZH2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC26.48■■□□□ 1.83
XRN1Q8IZH2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
XRN1Q8IZH2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 PENK-208ENST00000523051 772 ntTSL 5 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 AC091304.2-201ENST00000564639 760 ntBASIC26.47■■□□□ 1.83
XRN1Q8IZH2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 AC010240.3-201ENST00000607688 395 ntBASIC26.47■■□□□ 1.83
XRN1Q8IZH2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
XRN1Q8IZH2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 GPR32P1-201ENST00000601788 811 ntBASIC26.46■■□□□ 1.83
XRN1Q8IZH2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
XRN1Q8IZH2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
XRN1Q8IZH2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
XRN1Q8IZH2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
XRN1Q8IZH2 SAPCD2P3-201ENST00000455031 850 ntBASIC26.45■■□□□ 1.83
XRN1Q8IZH2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC26.45■■□□□ 1.83
XRN1Q8IZH2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
XRN1Q8IZH2 AL353801.3-201ENST00000609898 542 ntBASIC26.45■■□□□ 1.83
XRN1Q8IZH2 REXO1L6P-202ENST00000619970 1078 ntBASIC26.45■■□□□ 1.83
XRN1Q8IZH2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
XRN1Q8IZH2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 AL592071.1-201ENST00000611956 408 ntBASIC26.45■■□□□ 1.82
XRN1Q8IZH2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC26.45■■□□□ 1.82
XRN1Q8IZH2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
XRN1Q8IZH2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 AC099336.1-202ENST00000602961 463 ntBASIC26.43■■□□□ 1.82
XRN1Q8IZH2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC26.43■■□□□ 1.82
XRN1Q8IZH2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 BX640515.1-201ENST00000617215 977 ntBASIC26.42■■□□□ 1.82
XRN1Q8IZH2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 IGHV3-47-201ENST00000425060 335 ntBASIC26.42■■□□□ 1.82
XRN1Q8IZH2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC26.42■■□□□ 1.82
XRN1Q8IZH2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms