Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN4BQ8IWT1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN4BQ8IWT1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.08■□□□□ 0.8
SCN4BQ8IWT1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN4BQ8IWT1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.08■□□□□ 0.8
SCN4BQ8IWT1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN4BQ8IWT1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN4BQ8IWT1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SCN4BQ8IWT1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 AC006011.2-201ENST00000621313 1158 ntBASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.07■□□□□ 0.8
SCN4BQ8IWT1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 BX664615.1-201ENST00000443558 458 ntBASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 DUX4L26-201ENST00000489078 1255 ntBASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCN4BQ8IWT1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 AL445228.2-201ENST00000605589 952 ntBASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 AL138966.2-201ENST00000621997 464 ntBASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SCN4BQ8IWT1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SCN4BQ8IWT1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms