Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 FAM197Y1-201ENST00000421178 764 ntBASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 KSR1P1-201ENST00000446298 240 ntBASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 AL353708.3-201ENST00000610272 989 ntBASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 CR392000.1-201ENST00000624770 1228 ntBASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CHMP1BQ7LBR1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 AL162377.1-201ENST00000618844 1793 ntBASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP1BQ7LBR1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 NIFKP9-201ENST00000419265 221 ntBASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 C1QL1P1-201ENST00000568105 661 ntBASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 AC026471.5-201ENST00000615068 467 ntBASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP1BQ7LBR1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms