Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 WIZP1-201ENST00000531444 2299 ntBASIC17.54■□□□□ 0.4
TUBA1AQ71U36 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.54■□□□□ 0.4
TUBA1AQ71U36 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.53■□□□□ 0.4
TUBA1AQ71U36 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 ESRRAP1-201ENST00000400596 1257 ntBASIC17.53■□□□□ 0.4
TUBA1AQ71U36 AL390719.1-204ENST00000412397 1219 ntBASIC17.53■□□□□ 0.4
TUBA1AQ71U36 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1AQ71U36 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 AC005829.2-201ENST00000571422 1056 ntBASIC17.52■□□□□ 0.4
TUBA1AQ71U36 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1AQ71U36 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA1AQ71U36 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA1AQ71U36 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA1AQ71U36 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA1AQ71U36 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ABHD17AP1-201ENST00000358206 933 ntBASIC17.51■□□□□ 0.39
TUBA1AQ71U36 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 FAM201B-201ENST00000458407 597 ntBASIC17.51■□□□□ 0.39
TUBA1AQ71U36 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 AP003097.1-201ENST00000530657 1135 ntBASIC17.51■□□□□ 0.39
TUBA1AQ71U36 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 AL161938.1-201ENST00000569833 2180 ntBASIC17.51■□□□□ 0.39
TUBA1AQ71U36 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms