Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDHR3Q6ZTQ4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDHR3Q6ZTQ4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDHR3Q6ZTQ4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.12■□□□□ 0.65
CDHR3Q6ZTQ4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDHR3Q6ZTQ4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDHR3Q6ZTQ4 BICD1-207ENST00000551848 1962 ntBASIC19.12■□□□□ 0.65
CDHR3Q6ZTQ4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDHR3Q6ZTQ4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 AC239809.2-201ENST00000415381 517 ntBASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 AC124016.1-201ENST00000609552 612 ntBASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDHR3Q6ZTQ4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDHR3Q6ZTQ4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.08■□□□□ 0.65
CDHR3Q6ZTQ4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDHR3Q6ZTQ4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.08■□□□□ 0.65
CDHR3Q6ZTQ4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms