Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 AF186192.3-201ENST00000583427 947 ntBASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 KSR1P1-201ENST00000446298 240 ntBASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 AC142381.4-202ENST00000563973 229 ntBASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
NHLRC1Q6VVB1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 AC005332.8-201ENST00000622750 2735 ntBASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 IRX1P1-201ENST00000438849 1838 ntBASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 AL049812.1-201ENST00000432563 2267 ntBASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NHLRC1Q6VVB1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 FP475955.4-201ENST00000623131 1990 ntBASIC17.08■□□□□ 0.33
NHLRC1Q6VVB1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms