Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
CASC1Q6TDU7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 TSPY21P-201ENST00000433481 731 ntBASIC23.27■■□□□ 1.32
CASC1Q6TDU7 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 C1QL1P1-201ENST00000568105 661 ntBASIC23.27■■□□□ 1.32
CASC1Q6TDU7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CASC1Q6TDU7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 AL160286.2-201ENST00000567150 934 ntBASIC23.26■■□□□ 1.31
CASC1Q6TDU7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CASC1Q6TDU7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 MIR4651-201ENST00000582622 73 ntBASIC23.25■■□□□ 1.31
CASC1Q6TDU7 AC069544.1-201ENST00000609399 999 ntBASIC23.25■■□□□ 1.31
CASC1Q6TDU7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASC1Q6TDU7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.24■■□□□ 1.31
CASC1Q6TDU7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms