Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 PCED1CP-201ENST00000419887 785 ntBASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 GCSHP2-201ENST00000560971 527 ntBASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 HYMAI.1-201ENST00000620949 238 ntBASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC62Q6P9F0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC62Q6P9F0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC62Q6P9F0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.39■■□□□ 1.02
CCDC62Q6P9F0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC62Q6P9F0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.39■■□□□ 1.02
CCDC62Q6P9F0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.39■■□□□ 1.02
CCDC62Q6P9F0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC62Q6P9F0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCDC62Q6P9F0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 STARP1-201ENST00000397973 869 ntBASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 AC116407.4-201ENST00000623319 1061 ntBASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC62Q6P9F0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 AC005332.1-201ENST00000577698 1310 ntBASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC62Q6P9F0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms