Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 AL138781.2-201ENST00000617896 1843 ntBASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF549Q6P9A3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF549Q6P9A3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 KRT18P29-201ENST00000397031 1267 ntBASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 AP002982.1-201ENST00000492365 877 ntBASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 AF186192.3-201ENST00000583427 947 ntBASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF549Q6P9A3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 AL031598.1-201ENST00000561511 1773 ntBASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 KSR1P1-201ENST00000446298 240 ntBASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 AC098590.1-201ENST00000468126 897 ntBASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF549Q6P9A3 AC131212.4-201ENST00000623606 975 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms