Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 FP475955.4-201ENST00000623131 1990 ntBASIC19.41■□□□□ 0.7
CASC4Q6P4E1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASC4Q6P4E1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 NBPF21P-201ENST00000425093 1451 ntBASIC19.4■□□□□ 0.7
CASC4Q6P4E1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASC4Q6P4E1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
CASC4Q6P4E1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASC4Q6P4E1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASC4Q6P4E1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASC4Q6P4E1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CASC4Q6P4E1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms