Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 HTR7P1-202ENST00000624664 4411 ntBASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 AP006587.1-201ENST00000534129 1502 ntBASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00242Q5T6M2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00242Q5T6M2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 KRT18P5-201ENST00000436075 1291 ntBASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 YBX1P10-201ENST00000444752 975 ntBASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00242Q5T6M2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 AC005181.1-201ENST00000604782 1256 ntBASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 AC124283.5-201ENST00000624661 1809 ntBASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00242Q5T6M2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms