Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARS2Q5ST30 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VARS2Q5ST30 KRT18P38-201ENST00000449496 1282 ntBASIC20.17■□□□□ 0.82
VARS2Q5ST30 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.17■□□□□ 0.82
VARS2Q5ST30 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VARS2Q5ST30 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
VARS2Q5ST30 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VARS2Q5ST30 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.16■□□□□ 0.82
VARS2Q5ST30 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 GCSHP2-201ENST00000560971 527 ntBASIC20.15■□□□□ 0.82
VARS2Q5ST30 AC091076.1-201ENST00000610741 619 ntBASIC20.15■□□□□ 0.82
VARS2Q5ST30 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VARS2Q5ST30 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.15■□□□□ 0.82
VARS2Q5ST30 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
VARS2Q5ST30 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.14■□□□□ 0.82
VARS2Q5ST30 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.82
VARS2Q5ST30 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VARS2Q5ST30 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VARS2Q5ST30 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 AL671277.2-201ENST00000458060 996 ntBASIC20.14■□□□□ 0.81
VARS2Q5ST30 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 KRT126P-201ENST00000549467 1181 ntBASIC20.14■□□□□ 0.81
VARS2Q5ST30 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VARS2Q5ST30 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VARS2Q5ST30 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VARS2Q5ST30 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.14■□□□□ 0.81
VARS2Q5ST30 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 TEX21P-204ENST00000641479 1693 ntBASIC20.13■□□□□ 0.81
VARS2Q5ST30 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 AL023284.2-201ENST00000405850 579 ntBASIC20.13■□□□□ 0.81
VARS2Q5ST30 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.13■□□□□ 0.81
VARS2Q5ST30 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 AL121956.5-201ENST00000625261 221 ntBASIC20.13■□□□□ 0.81
VARS2Q5ST30 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms