Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
PDCD4Q53EL6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 AC120498.8-201ENST00000614275 531 ntBASIC18.28■□□□□ 0.52
PDCD4Q53EL6 MYC-209ENST00000641252 345 ntBASIC18.28■□□□□ 0.52
PDCD4Q53EL6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.28■□□□□ 0.52
PDCD4Q53EL6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 AL354751.1-201ENST00000412768 1863 ntBASIC18.28■□□□□ 0.52
PDCD4Q53EL6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDCD4Q53EL6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 PNMA6B-201ENST00000538162 1200 ntBASIC18.27■□□□□ 0.52
PDCD4Q53EL6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 AC060766.5-201ENST00000590539 871 ntBASIC18.27■□□□□ 0.52
PDCD4Q53EL6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDCD4Q53EL6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PDCD4Q53EL6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDCD4Q53EL6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms