Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
EFNB3Q15768 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.23■□□□□ 0.19
EFNB3Q15768 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.23■□□□□ 0.19
EFNB3Q15768 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.23■□□□□ 0.19
EFNB3Q15768 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.23■□□□□ 0.19
EFNB3Q15768 AL445228.2-201ENST00000605589 952 ntBASIC16.23■□□□□ 0.19
EFNB3Q15768 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
EFNB3Q15768 AL031432.5-201ENST00000641059 760 ntBASIC16.23■□□□□ 0.19
EFNB3Q15768 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EFNB3Q15768 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EFNB3Q15768 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
EFNB3Q15768 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.23■□□□□ 0.19
EFNB3Q15768 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EFNB3Q15768 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EFNB3Q15768 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EFNB3Q15768 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EFNB3Q15768 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.22■□□□□ 0.19
EFNB3Q15768 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.22■□□□□ 0.19
EFNB3Q15768 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 AK4P3-201ENST00000418260 669 ntBASIC16.22■□□□□ 0.19
EFNB3Q15768 COX11P1-201ENST00000489116 835 ntBASIC16.22■□□□□ 0.19
EFNB3Q15768 KRT18P35-201ENST00000510488 1269 ntBASIC16.22■□□□□ 0.19
EFNB3Q15768 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.22■□□□□ 0.19
EFNB3Q15768 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 LINC01238-205ENST00000567549 1107 ntBASIC16.22■□□□□ 0.19
EFNB3Q15768 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.22■□□□□ 0.19
EFNB3Q15768 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.22■□□□□ 0.19
EFNB3Q15768 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.22■□□□□ 0.19
EFNB3Q15768 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.22■□□□□ 0.19
EFNB3Q15768 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
EFNB3Q15768 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EFNB3Q15768 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
EFNB3Q15768 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.21■□□□□ 0.19
EFNB3Q15768 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.21■□□□□ 0.19
EFNB3Q15768 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.21■□□□□ 0.19
EFNB3Q15768 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.21■□□□□ 0.19
EFNB3Q15768 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.21■□□□□ 0.19
EFNB3Q15768 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.21■□□□□ 0.19
EFNB3Q15768 AC117947.1-201ENST00000427448 529 ntBASIC16.21■□□□□ 0.19
EFNB3Q15768 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EFNB3Q15768 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EFNB3Q15768 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.21■□□□□ 0.19
EFNB3Q15768 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.21■□□□□ 0.19
EFNB3Q15768 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.21■□□□□ 0.19
EFNB3Q15768 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EFNB3Q15768 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
EFNB3Q15768 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.21■□□□□ 0.19
EFNB3Q15768 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EFNB3Q15768 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EFNB3Q15768 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
EFNB3Q15768 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EFNB3Q15768 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.21■□□□□ 0.18
EFNB3Q15768 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.21■□□□□ 0.18
EFNB3Q15768 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.21■□□□□ 0.18
EFNB3Q15768 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
EFNB3Q15768 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
EFNB3Q15768 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.2■□□□□ 0.18
EFNB3Q15768 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms