Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ATXN2-206ENST00000471866 836 ntTSL 44.8□□□□□ -1.646e-6■■□□□ 12.1
SRSF1Q07955 SPEN-203ENST00000442985 891 ntTSL 54.79□□□□□ -1.646e-6■■□□□ 12.1
SRSF1Q07955 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.68□□□□□ -1.666e-6■■□□□ 12.1
SRSF1Q07955 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.676e-6■■□□□ 12.1
SRSF1Q07955 TIMMDC1-209ENST00000498399 684 ntTSL 24.34□□□□□ -1.716e-6■■□□□ 12.1
SRSF1Q07955 POLG-219ENST00000636937 100 ntTSL 51.18□□□□□ -2.226e-6■■□□□ 12.1
SRSF1Q07955 SLC25A37-202ENST00000417331 735 ntTSL 518.4■□□□□ 0.547e-9■■□□□ 12.1
SRSF1Q07955 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)17.89■□□□□ 0.457e-9■■□□□ 12.1
SRSF1Q07955 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.437e-9■■□□□ 12.1
SRSF1Q07955 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)10.88□□□□□ -0.677e-9■■□□□ 12.1
SRSF1Q07955 SERGEF-212ENST00000529728 1396 ntTSL 523.35■■□□□ 1.334e-6■■□□□ 12
SRSF1Q07955 SERGEF-214ENST00000530925 793 ntTSL 321.31■■□□□ 14e-6■■□□□ 12
SRSF1Q07955 SERGEF-213ENST00000530613 893 ntTSL 521.25■□□□□ 0.994e-6■■□□□ 12
SRSF1Q07955 RNF31-219ENST00000559882 554 ntTSL 421.23■□□□□ 0.999e-13■■□□□ 12
SRSF1Q07955 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.15■□□□□ 0.984e-6■■□□□ 12
SRSF1Q07955 SERGEF-207ENST00000527494 1314 ntTSL 520.32■□□□□ 0.844e-6■■□□□ 12
SRSF1Q07955 SERGEF-220ENST00000532389 833 ntTSL 520.01■□□□□ 0.794e-6■■□□□ 12
SRSF1Q07955 SERGEF-218ENST00000532212 622 ntTSL 319.53■□□□□ 0.724e-6■■□□□ 12
SRSF1Q07955 SERGEF-223ENST00000533328 541 ntTSL 519.53■□□□□ 0.724e-6■■□□□ 12
SRSF1Q07955 RNF31-205ENST00000557991 578 ntTSL 419.22■□□□□ 0.679e-13■■□□□ 12
SRSF1Q07955 RNF31-225ENST00000560875 550 ntTSL 418.35■□□□□ 0.539e-13■■□□□ 12
SRSF1Q07955 ZGPAT-205ENST00000431125 427 ntTSL 218.05■□□□□ 0.488e-7■■□□□ 12
SRSF1Q07955 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.294e-6■■□□□ 12
SRSF1Q07955 RNF31-221ENST00000560342 888 ntTSL 215.89■□□□□ 0.139e-13■■□□□ 12
SRSF1Q07955 SERGEF-205ENST00000525422 1525 ntTSL 1 (best)15.63■□□□□ 0.094e-6■■□□□ 12
SRSF1Q07955 RNF31-207ENST00000558634 537 ntTSL 415.01□□□□□ -0.019e-13■■□□□ 12
SRSF1Q07955 RNF31-216ENST00000559533 889 ntTSL 414.77□□□□□ -0.059e-13■■□□□ 12
SRSF1Q07955 RNF31-204ENST00000557878 574 ntTSL 413.37□□□□□ -0.279e-13■■□□□ 12
SRSF1Q07955 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.39□□□□□ -0.434e-6■■□□□ 12
SRSF1Q07955 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.559e-13■■□□□ 12
SRSF1Q07955 RNF31-213ENST00000559438 557 ntTSL 411.58□□□□□ -0.569e-13■■□□□ 12
SRSF1Q07955 RNF31-220ENST00000560071 576 ntTSL 511.14□□□□□ -0.639e-13■■□□□ 12
SRSF1Q07955 RNF31-212ENST00000559308 559 ntTSL 511.14□□□□□ -0.639e-13■■□□□ 12
SRSF1Q07955 RNF31-210ENST00000559260 551 ntTSL 510.45□□□□□ -0.749e-13■■□□□ 12
SRSF1Q07955 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.11□□□□□ -1.114e-6■■□□□ 12
SRSF1Q07955 SERGEF-203ENST00000524716 548 ntTSL 48□□□□□ -1.134e-6■■□□□ 12
SRSF1Q07955 KPNB1-211ENST00000582097 2347 ntTSL 27.08□□□□□ -1.281e-6■■□□□ 12
SRSF1Q07955 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.54□□□□□ -1.521e-6■■□□□ 12
SRSF1Q07955 MICALL2-202ENST00000413446 3046 ntTSL 210.47□□□□□ -0.731e-6■■□□□ 12
SRSF1Q07955 GUK1-221ENST00000472939 314 ntTSL 312.86□□□□□ -0.352e-7■■□□□ 12
SRSF1Q07955 GUK1-226ENST00000484953 273 ntTSL 212.64□□□□□ -0.392e-7■■□□□ 12
SRSF1Q07955 GUK1-233ENST00000491613 959 ntTSL 312.46□□□□□ -0.412e-7■■□□□ 12
SRSF1Q07955 GUK1-229ENST00000485733 345 ntTSL 310.87□□□□□ -0.672e-7■■□□□ 12
SRSF1Q07955 ENOSF1-218ENST00000584453 1230 ntTSL 521.88■■□□□ 1.092e-6■■□□□ 12
SRSF1Q07955 ENOSF1-206ENST00000578651 1177 ntTSL 218.24■□□□□ 0.512e-6■■□□□ 12
SRSF1Q07955 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.382e-6■■□□□ 12
SRSF1Q07955 ENOSF1-211ENST00000581475 1745 ntTSL 1 (best)16.15■□□□□ 0.182e-6■■□□□ 12
SRSF1Q07955 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.22■□□□□ 0.032e-6■■□□□ 12
SRSF1Q07955 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.57□□□□□ -0.082e-6■■□□□ 12
SRSF1Q07955 ENOSF1-222ENST00000585128 1296 ntTSL 513.32□□□□□ -0.282e-6■■□□□ 12
SRSF1Q07955 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC9.85□□□□□ -0.832e-6■■□□□ 12
SRSF1Q07955 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.22e-9■■□□□ 12
SRSF1Q07955 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.452e-9■■□□□ 12
SRSF1Q07955 USP36-214ENST00000589225 5885 ntTSL 1 (best)11.75□□□□□ -0.532e-9■■□□□ 12
SRSF1Q07955 RBM25-208ENST00000530978 441 ntTSL 28.15□□□□□ -1.12e-7■■□□□ 12
SRSF1Q07955 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.181e-9■■□□□ 12
SRSF1Q07955 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.69□□□□□ -0.381e-9■■□□□ 12
SRSF1Q07955 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.4□□□□□ -0.421e-9■■□□□ 12
SRSF1Q07955 MGME1-205ENST00000467391 740 ntTSL 1 (best)8.26□□□□□ -1.091e-9■■□□□ 12
SRSF1Q07955 MGME1-204ENST00000463219 571 ntTSL 38.24□□□□□ -1.091e-9■■□□□ 12
SRSF1Q07955 GUK1-227ENST00000485083 871 ntTSL 323.94■■□□□ 1.421e-7■■□□□ 12
SRSF1Q07955 GUK1-236ENST00000493209 735 ntTSL 519.33■□□□□ 0.681e-7■■□□□ 12
SRSF1Q07955 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.532e-7■■□□□ 12
SRSF1Q07955 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.16□□□□□ -0.622e-7■■□□□ 12
SRSF1Q07955 MED15-211ENST00000433831 3267 ntTSL 511□□□□□ -0.652e-7■■□□□ 12
SRSF1Q07955 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.88□□□□□ -0.672e-7■■□□□ 12
SRSF1Q07955 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.822e-7■■□□□ 12
SRSF1Q07955 SEC31A-230ENST00000510167 857 ntTSL 49.07□□□□□ -0.969e-9■■□□□ 12
SRSF1Q07955 SEC31A-234ENST00000512664 710 ntTSL 35.41□□□□□ -1.549e-9■■□□□ 12
SRSF1Q07955 SEC31A-224ENST00000507828 1329 ntTSL 55□□□□□ -1.619e-9■■□□□ 12
SRSF1Q07955 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.04□□□□□ -1.769e-9■■□□□ 12
SRSF1Q07955 NUP160-207ENST00000528501 1961 ntTSL 214.91□□□□□ -0.022e-6■■□□□ 12
SRSF1Q07955 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.62e-6■■□□□ 12
SRSF1Q07955 NUP160-206ENST00000528071 4138 ntTSL 58.97□□□□□ -0.972e-6■■□□□ 12
SRSF1Q07955 NUP160-209ENST00000530326 4811 ntAPPRIS ALT2 TSL 55□□□□□ -1.612e-6■■□□□ 12
SRSF1Q07955 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.96■□□□□ 0.632e-8■■□□□ 12
SRSF1Q07955 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.35■□□□□ 0.212e-8■■□□□ 12
SRSF1Q07955 PPOX-212ENST00000495483 2471 ntTSL 215.59■□□□□ 0.092e-8■■□□□ 12
SRSF1Q07955 PPOX-213ENST00000497522 816 ntTSL 415.11■□□□□ 0.012e-8■■□□□ 12
SRSF1Q07955 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.12e-8■■□□□ 12
SRSF1Q07955 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.16□□□□□ -0.142e-8■■□□□ 12
SRSF1Q07955 PPOX-217ENST00000539753 816 ntTSL 513.99□□□□□ -0.172e-8■■□□□ 12
SRSF1Q07955 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-8■■□□□ 12
SRSF1Q07955 DIP2B-204ENST00000549620 2676 ntTSL 1 (best)14.64□□□□□ -0.077e-12■■□□□ 12
SRSF1Q07955 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.477e-12■■□□□ 12
SRSF1Q07955 RBM39-229ENST00000475651 555 ntTSL 53.51□□□□□ -1.851e-10■■□□□ 12
SRSF1Q07955 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.78e-7■■□□□ 12
SRSF1Q07955 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.838e-7■■□□□ 12
SRSF1Q07955 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.321e-8■■□□□ 12
SRSF1Q07955 NUP160-208ENST00000529863 348 ntTSL 512.71□□□□□ -0.371e-8■■□□□ 12
SRSF1Q07955 FLNA-215ENST00000474358 696 ntTSL 216.85■□□□□ 0.292e-12■■□□□ 12
SRSF1Q07955 FLNA-209ENST00000444578 843 ntTSL 316.59■□□□□ 0.252e-12■■□□□ 12
SRSF1Q07955 FLNA-216ENST00000490936 5374 ntTSL 1 (best)13.2□□□□□ -0.32e-12■■□□□ 12
SRSF1Q07955 FLNA-217ENST00000498411 368 ntTSL 312.77□□□□□ -0.372e-12■■□□□ 12
SRSF1Q07955 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.472e-12■■□□□ 12
SRSF1Q07955 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.622e-12■■□□□ 12
SRSF1Q07955 FLNA-206ENST00000420627 8225 ntTSL 511.08□□□□□ -0.642e-12■■□□□ 12
SRSF1Q07955 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.662e-12■■□□□ 12
SRSF1Q07955 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.722e-12■■□□□ 12
SRSF1Q07955 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.792e-12■■□□□ 12
Retrieved 100 of 14,836 protein–RNA pairs in 127.7 ms