RNA–Protein interactions for RNA: ENST00000471866.5

ATXN2-206, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 836 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-206ENST00000471866 AEBP2Q6ZN18 517 aaPredicted RBP32.74■■■□□ 2.83
ATXN2-206ENST00000471866 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
ATXN2-206ENST00000471866 SENP3Q9H4L4 574 aaPredicted RBP28.09■■■□□ 2.09
ATXN2-206ENST00000471866 PHF23Q9BUL5 403 aaPredicted RBP27.63■■■□□ 2.01
ATXN2-206ENST00000471866 FOXD1Q16676 465 aa26.14■■□□□ 1.78
ATXN2-206ENST00000471866 MSH5O43196 834 aa24.69■■□□□ 1.54
ATXN2-206ENST00000471866 PLPPR3Q6T4P5 718 aa24.57■■□□□ 1.52
ATXN2-206ENST00000471866 POTEDQ86YR6 584 aa24.53■■□□□ 1.52
ATXN2-206ENST00000471866 PIAS4Q8N2W9 510 aaPredicted RBP24.42■■□□□ 1.5
ATXN2-206ENST00000471866 PPP6R1Q9UPN7 881 aa24.16■■□□□ 1.46
ATXN2-206ENST00000471866 ADRA2BP18089 450 aa24.1■■□□□ 1.45
ATXN2-206ENST00000471866 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
ATXN2-206ENST00000471866 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
ATXN2-206ENST00000471866 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
ATXN2-206ENST00000471866 PPP4R3CPQ6ZMV5 832 aa21.47■■□□□ 1.03
ATXN2-206ENST00000471866 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
ATXN2-206ENST00000471866 CACNB1Q02641 598 aaPredicted RBP21.36■■□□□ 1.01
ATXN2-206ENST00000471866 HOXD11P31277 338 aaPredicted RBP21.25■□□□□ 0.99
ATXN2-206ENST00000471866 CNKSR2Q8WXI2 1034 aa21.16■□□□□ 0.98
ATXN2-206ENST00000471866 RNF216Q9NWF9 866 aaPredicted RBP21.04■□□□□ 0.96
ATXN2-206ENST00000471866 RNF39Q9H2S5 420 aa20.97■□□□□ 0.95
ATXN2-206ENST00000471866 C1QBPQ07021 282 aaKnown RBP20.69■□□□□ 0.9
ATXN2-206ENST00000471866 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
ATXN2-206ENST00000471866 DNAJC5BQ9UF47 199 aa20.62■□□□□ 0.89
ATXN2-206ENST00000471866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.84
ATXN2-206ENST00000471866 NPM3O75607 178 aaKnown RBP20.23■□□□□ 0.83
ATXN2-206ENST00000471866 U3KPZ7 1027 aaPredicted RBP19.78■□□□□ 0.76
ATXN2-206ENST00000471866 CAPN15O75808 1086 aa19.63■□□□□ 0.73
ATXN2-206ENST00000471866 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
ATXN2-206ENST00000471866 KCNA4P22459 653 aa19.55■□□□□ 0.72
ATXN2-206ENST00000471866 DSG3P32926 999 aa19.53■□□□□ 0.72
ATXN2-206ENST00000471866 SLC4A2P04920 1241 aa19.36■□□□□ 0.69
ATXN2-206ENST00000471866 APLP2Q06481 763 aa19.35■□□□□ 0.69
ATXN2-206ENST00000471866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-206ENST00000471866 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-206ENST00000471866 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
ATXN2-206ENST00000471866 ZNF219Q9P2Y4 722 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-206ENST00000471866 POTEHQ6S545 545 aa19.2■□□□□ 0.66
ATXN2-206ENST00000471866 ABCB7O75027 752 aa19.11■□□□□ 0.65
ATXN2-206ENST00000471866 SAMD1Q6SPF0 538 aaPredicted RBP19.07■□□□□ 0.64
ATXN2-206ENST00000471866 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
ATXN2-206ENST00000471866 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
ATXN2-206ENST00000471866 POLA2Q14181 598 aa18.62■□□□□ 0.57
ATXN2-206ENST00000471866 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
ATXN2-206ENST00000471866 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
ATXN2-206ENST00000471866 CHRDL2Q6WN34 429 aa18.39■□□□□ 0.53
ATXN2-206ENST00000471866 ZBTB12Q9Y330 459 aaPredicted RBP18.3■□□□□ 0.52
ATXN2-206ENST00000471866 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
ATXN2-206ENST00000471866 AKT1S1Q96B36 256 aa18.21■□□□□ 0.51
ATXN2-206ENST00000471866 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
ATXN2-206ENST00000471866 REM2Q8IYK8 340 aaPredicted RBP17.99■□□□□ 0.47
ATXN2-206ENST00000471866 ZBTB22O15209 634 aa17.92■□□□□ 0.46
ATXN2-206ENST00000471866 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
ATXN2-206ENST00000471866 PIP4P2Q8N4L2 257 aa17.87■□□□□ 0.45
ATXN2-206ENST00000471866 SP7Q8TDD2 431 aaPredicted RBP17.86■□□□□ 0.45
ATXN2-206ENST00000471866 PITPNM1O00562 1244 aa17.8■□□□□ 0.44
ATXN2-206ENST00000471866 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.437e-7■□□□□ 9.9
ATXN2-206ENST00000471866 FBLN2P98095 1184 aa17.71■□□□□ 0.43
ATXN2-206ENST00000471866 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
ATXN2-206ENST00000471866 HAX1O00165 279 aa17.66■□□□□ 0.42
ATXN2-206ENST00000471866 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
ATXN2-206ENST00000471866 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
ATXN2-206ENST00000471866 SPDYE1Q8NFV5 336 aaPredicted RBP17.44■□□□□ 0.38
ATXN2-206ENST00000471866 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
ATXN2-206ENST00000471866 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
ATXN2-206ENST00000471866 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
ATXN2-206ENST00000471866 PRKAR2AP13861 404 aaKnown RBP17.37■□□□□ 0.37
ATXN2-206ENST00000471866 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
ATXN2-206ENST00000471866 EVX2Q03828 476 aa17.31■□□□□ 0.36
ATXN2-206ENST00000471866 C19orf67A6NJJ6 358 aa17.16■□□□□ 0.34
ATXN2-206ENST00000471866 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATXN2-206ENST00000471866 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
ATXN2-206ENST00000471866 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
ATXN2-206ENST00000471866 GABBR2O75899 941 aa16.98■□□□□ 0.31
ATXN2-206ENST00000471866 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
ATXN2-206ENST00000471866 FARP1Q9Y4F1 1045 aaPredicted RBP16.82■□□□□ 0.28
ATXN2-206ENST00000471866 CD44P16070 742 aaKnown RBP16.81■□□□□ 0.28
ATXN2-206ENST00000471866 LHX8Q68G74 356 aa16.74■□□□□ 0.27
ATXN2-206ENST00000471866 CLCN6P51797 869 aa16.7■□□□□ 0.26
ATXN2-206ENST00000471866 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
ATXN2-206ENST00000471866 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
ATXN2-206ENST00000471866 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
ATXN2-206ENST00000471866 DCBLD2Q96PD2 775 aa16.53■□□□□ 0.24
ATXN2-206ENST00000471866 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
ATXN2-206ENST00000471866 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
ATXN2-206ENST00000471866 ZNF579Q8NAF0 562 aaKnown RBP16.52■□□□□ 0.24
ATXN2-206ENST00000471866 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
ATXN2-206ENST00000471866 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
ATXN2-206ENST00000471866 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATXN2-206ENST00000471866 GALR2O43603 387 aaPredicted RBP16.31■□□□□ 0.2
ATXN2-206ENST00000471866 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
ATXN2-206ENST00000471866 MNX1P50219 401 aaPredicted RBP16.18■□□□□ 0.18
ATXN2-206ENST00000471866 OTUD5Q96G74 571 aa16.04■□□□□ 0.16
ATXN2-206ENST00000471866 PROM2Q8N271 834 aa16.01■□□□□ 0.15
ATXN2-206ENST00000471866 MS4A3Q96HJ5 214 aa16.01■□□□□ 0.15
ATXN2-206ENST00000471866 POTEB2H3BUK9 544 aa16■□□□□ 0.15
ATXN2-206ENST00000471866 PELP1Q8IZL8 1130 aaKnown RBP15.98■□□□□ 0.15
ATXN2-206ENST00000471866 ASTLQ6HA08 431 aaPredicted RBP15.97■□□□□ 0.15
ATXN2-206ENST00000471866 TSPYL2Q9H2G4 693 aaPredicted RBP15.97■□□□□ 0.15
ATXN2-206ENST00000471866 SLC39A7Q92504 469 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms