Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
GABREP78334 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.09■□□□□ 0.49
GABREP78334 AC073314.1-201ENST00000568729 2216 ntBASIC18.08■□□□□ 0.49
GABREP78334 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GABREP78334 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
GABREP78334 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.08■□□□□ 0.49
GABREP78334 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.08■□□□□ 0.49
GABREP78334 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GABREP78334 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
GABREP78334 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GABREP78334 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
GABREP78334 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GABREP78334 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
GABREP78334 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GABREP78334 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GABREP78334 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
GABREP78334 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GABREP78334 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
GABREP78334 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.08■□□□□ 0.48
GABREP78334 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.08■□□□□ 0.48
GABREP78334 FDX1P1-201ENST00000449115 551 ntBASIC18.08■□□□□ 0.48
GABREP78334 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.08■□□□□ 0.48
GABREP78334 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.08■□□□□ 0.48
GABREP78334 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
GABREP78334 AC011498.5-201ENST00000592027 486 ntBASIC18.08■□□□□ 0.48
GABREP78334 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GABREP78334 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GABREP78334 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
GABREP78334 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
GABREP78334 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.08■□□□□ 0.48
GABREP78334 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GABREP78334 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.08■□□□□ 0.48
GABREP78334 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GABREP78334 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.07■□□□□ 0.48
GABREP78334 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.07■□□□□ 0.48
GABREP78334 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GABREP78334 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.07■□□□□ 0.48
GABREP78334 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.07■□□□□ 0.48
GABREP78334 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GABREP78334 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.07■□□□□ 0.48
GABREP78334 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
GABREP78334 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GABREP78334 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 AC092667.1-201ENST00000434301 2586 ntBASIC18.06■□□□□ 0.48
GABREP78334 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
GABREP78334 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.06■□□□□ 0.48
GABREP78334 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
GABREP78334 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 FAAHP1-202ENST00000446499 1238 ntBASIC18.06■□□□□ 0.48
GABREP78334 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.06■□□□□ 0.48
GABREP78334 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GABREP78334 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 KRT8P10-201ENST00000450021 1447 ntBASIC18.06■□□□□ 0.48
GABREP78334 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.06■□□□□ 0.48
GABREP78334 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GABREP78334 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
GABREP78334 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GABREP78334 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
GABREP78334 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.05■□□□□ 0.48
GABREP78334 AC073130.3-201ENST00000624389 2278 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms