Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.2■□□□□ 0.34
RPS4XP62701 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS4XP62701 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RPS4XP62701 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 AC211429.1-201ENST00000415277 523 ntBASIC17.2■□□□□ 0.34
RPS4XP62701 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.2■□□□□ 0.34
RPS4XP62701 BX088651.1-201ENST00000540551 451 ntBASIC17.2■□□□□ 0.34
RPS4XP62701 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS4XP62701 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS4XP62701 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.2■□□□□ 0.34
RPS4XP62701 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.2■□□□□ 0.34
RPS4XP62701 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.2■□□□□ 0.34
RPS4XP62701 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS4XP62701 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.19■□□□□ 0.34
RPS4XP62701 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.19■□□□□ 0.34
RPS4XP62701 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.19■□□□□ 0.34
RPS4XP62701 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 TSPY23P-201ENST00000440136 739 ntBASIC17.19■□□□□ 0.34
RPS4XP62701 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.19■□□□□ 0.34
RPS4XP62701 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.19■□□□□ 0.34
RPS4XP62701 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.19■□□□□ 0.34
RPS4XP62701 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.19■□□□□ 0.34
RPS4XP62701 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPS4XP62701 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RPS4XP62701 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.19■□□□□ 0.34
RPS4XP62701 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.19■□□□□ 0.34
RPS4XP62701 AL512353.2-201ENST00000448759 1962 ntBASIC17.19■□□□□ 0.34
RPS4XP62701 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.18■□□□□ 0.34
RPS4XP62701 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RPS4XP62701 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.18■□□□□ 0.34
RPS4XP62701 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.18■□□□□ 0.34
RPS4XP62701 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.18■□□□□ 0.34
RPS4XP62701 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.18■□□□□ 0.34
RPS4XP62701 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.18■□□□□ 0.34
RPS4XP62701 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.18■□□□□ 0.34
RPS4XP62701 AC083906.6-201ENST00000641366 219 ntBASIC17.18■□□□□ 0.34
RPS4XP62701 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RPS4XP62701 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPS4XP62701 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4XP62701 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
RPS4XP62701 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RPS4XP62701 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4XP62701 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RPS4XP62701 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4XP62701 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4XP62701 KRT8P41-201ENST00000533985 1514 ntBASIC17.17■□□□□ 0.34
RPS4XP62701 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPS4XP62701 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms