Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CMC4P56277 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMC4P56277 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.21□□□□□ -0.13
CMC4P56277 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.21□□□□□ -0.14
CMC4P56277 AC073130.3-201ENST00000624389 2278 ntBASIC14.21□□□□□ -0.14
CMC4P56277 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CMC4P56277 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CMC4P56277 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CMC4P56277 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
CMC4P56277 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CMC4P56277 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
CMC4P56277 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CMC4P56277 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.2□□□□□ -0.14
CMC4P56277 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.2□□□□□ -0.14
CMC4P56277 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.2□□□□□ -0.14
CMC4P56277 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
CMC4P56277 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.2□□□□□ -0.14
CMC4P56277 MFAP1P1-201ENST00000442257 1255 ntBASIC14.2□□□□□ -0.14
CMC4P56277 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.2□□□□□ -0.14
CMC4P56277 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.2□□□□□ -0.14
CMC4P56277 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 AL355075.4-201ENST00000554988 638 ntBASIC14.2□□□□□ -0.14
CMC4P56277 NAPSB-206ENST00000562112 1266 ntBASIC14.2□□□□□ -0.14
CMC4P56277 AL512604.3-201ENST00000569583 964 ntBASIC14.2□□□□□ -0.14
CMC4P56277 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CMC4P56277 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CMC4P56277 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.2□□□□□ -0.14
CMC4P56277 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.2□□□□□ -0.14
CMC4P56277 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.2□□□□□ -0.14
CMC4P56277 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
CMC4P56277 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.2□□□□□ -0.14
CMC4P56277 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CMC4P56277 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMC4P56277 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 FEM1AP3-201ENST00000403722 1741 ntBASIC14.19□□□□□ -0.14
CMC4P56277 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 KRT8P11-201ENST00000409686 1436 ntBASIC14.19□□□□□ -0.14
CMC4P56277 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
CMC4P56277 MIR1238-201ENST00000408483 83 ntBASIC14.19□□□□□ -0.14
CMC4P56277 TSPY23P-201ENST00000440136 739 ntBASIC14.19□□□□□ -0.14
CMC4P56277 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CMC4P56277 AC073912.3-201ENST00000624414 853 ntBASIC14.19□□□□□ -0.14
CMC4P56277 AC116562.4-202ENST00000641738 218 ntBASIC14.19□□□□□ -0.14
CMC4P56277 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.19□□□□□ -0.14
CMC4P56277 AC141586.3-201ENST00000562166 1838 ntBASIC14.19□□□□□ -0.14
CMC4P56277 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 LINC01465-201ENST00000408887 1940 ntBASIC14.19□□□□□ -0.14
CMC4P56277 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CMC4P56277 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 SDHAP1-207ENST00000440850 2000 ntBASIC14.19□□□□□ -0.14
CMC4P56277 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CMC4P56277 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.18□□□□□ -0.14
CMC4P56277 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.18□□□□□ -0.14
CMC4P56277 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CMC4P56277 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.18□□□□□ -0.14
CMC4P56277 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.18□□□□□ -0.14
CMC4P56277 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CMC4P56277 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms