Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LETM1P2-201ENST00000597330 2178 ntBASIC17.74■□□□□ 0.43
CDH12P55289 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH12P55289 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH12P55289 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH12P55289 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CDH12P55289 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 AL512353.2-201ENST00000448759 1962 ntBASIC17.74■□□□□ 0.43
CDH12P55289 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH12P55289 AC090192.1-201ENST00000517740 490 ntBASIC17.74■□□□□ 0.43
CDH12P55289 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.74■□□□□ 0.43
CDH12P55289 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH12P55289 SOX15-203ENST00000570788 1093 ntBASIC17.74■□□□□ 0.43
CDH12P55289 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 BCL2-203ENST00000589955 5011 ntBASIC17.74■□□□□ 0.43
CDH12P55289 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH12P55289 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH12P55289 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH12P55289 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH12P55289 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH12P55289 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH12P55289 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH12P55289 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH12P55289 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH12P55289 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDH12P55289 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH12P55289 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH12P55289 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH12P55289 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH12P55289 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH12P55289 AC142086.2-201ENST00000569753 217 ntBASIC17.73■□□□□ 0.43
CDH12P55289 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH12P55289 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH12P55289 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH12P55289 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH12P55289 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH12P55289 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH12P55289 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH12P55289 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDH12P55289 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH12P55289 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDH12P55289 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH12P55289 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 AC079598.2-202ENST00000546624 1451 ntBASIC17.72■□□□□ 0.43
CDH12P55289 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH12P55289 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH12P55289 YBX1P10-201ENST00000444752 975 ntBASIC17.72■□□□□ 0.43
CDH12P55289 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH12P55289 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH12P55289 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH12P55289 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH12P55289 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH12P55289 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH12P55289 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms